PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221641.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 425aa    MW: 44977.8 Da    PI: 7.5778
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221641.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1263.9e-3959155289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++       
  XP_008221641.1  59 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSAPshylrpn 153
                     789******************************************************************99976666666666444434444433 PP

             TCP  89 .k 89 
                      +
  XP_008221641.1 154 sS 155
                     20 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.1E-3763183IPR005333Transcription factor, TCP
PROSITE profilePS5136927.63665119IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MIMEAENGIR CRPNFPLQFL DKNQDDDIQE APGDPGSNQN RPGSSLTQEQ QPNNGKKPPP  60
KRTSTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT  120
GTGTIPANFT SLNISLRSSG SSMSAPSHYL RPNSSNYFMN FNPNNLGAAA ASQLIMDENS  180
QRGRILFPGV GLLSSESSPS SSMLLNFNNA MLEAKRELRD QGGSLGEVSE GGEASTMGRK  240
RIRPEQDLLS SSSSSSSSSQ SSHHQMGISN SYMLQSASTG SIPASQSTIP ATFWMVANNP  300
SSGSGGGGHH VHEPPINPMW TIPSINNGIN SNMYRGASVS SGGGHGLHFM NFAPPPMAAI  360
LPSHMGSTPH GGGGSIADSH LGVMAALNAY RPILGGVMAE PPGGNNGQHS HHGADEGHDR  420
DSNAR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221641.10.0PREDICTED: transcription factor TCP15
SwissprotQ93Z003e-55TCP14_ARATH; Transcription factor TCP14
TrEMBLM5XQ320.0M5XQ32_PRUPE; Uncharacterized protein
STRINGVIT_01s0026g02200.t012e-99(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.14e-44TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14